Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PCK1P35558 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.4■□□□□ 0.38
PCK1P35558 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PCK1P35558 HCG4B-203ENST00000450128 991 ntBASIC17.4■□□□□ 0.38
PCK1P35558 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.4■□□□□ 0.38
PCK1P35558 AC079776.4-201ENST00000511039 504 ntBASIC17.4■□□□□ 0.38
PCK1P35558 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.4■□□□□ 0.38
PCK1P35558 AL645728.2-201ENST00000641974 660 ntBASIC17.4■□□□□ 0.38
PCK1P35558 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCK1P35558 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCK1P35558 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PCK1P35558 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.39■□□□□ 0.38
PCK1P35558 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCK1P35558 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.39■□□□□ 0.37
PCK1P35558 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 CRYGEP-201ENST00000412192 528 ntBASIC17.39■□□□□ 0.37
PCK1P35558 IGLL3P-201ENST00000412472 434 ntBASIC17.39■□□□□ 0.37
PCK1P35558 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.39■□□□□ 0.37
PCK1P35558 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.39■□□□□ 0.37
PCK1P35558 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.39■□□□□ 0.37
PCK1P35558 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.39■□□□□ 0.37
PCK1P35558 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.39■□□□□ 0.37
PCK1P35558 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PCK1P35558 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCK1P35558 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.38■□□□□ 0.37
PCK1P35558 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCK1P35558 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.38■□□□□ 0.37
PCK1P35558 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PCK1P35558 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.38■□□□□ 0.37
PCK1P35558 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.38■□□□□ 0.37
PCK1P35558 AC096734.2-201ENST00000562054 433 ntBASIC17.38■□□□□ 0.37
PCK1P35558 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.38■□□□□ 0.37
PCK1P35558 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 Z83851.2-201ENST00000609564 659 ntBASIC17.38■□□□□ 0.37
PCK1P35558 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.38■□□□□ 0.37
PCK1P35558 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.38■□□□□ 0.37
PCK1P35558 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.38■□□□□ 0.37
PCK1P35558 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCK1P35558 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms