Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.7■□□□□ 0.42
RFC2P35250 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC2P35250 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC2P35250 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC2P35250 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
RFC2P35250 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
RFC2P35250 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RFC2P35250 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.69■□□□□ 0.42
RFC2P35250 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFC2P35250 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.69■□□□□ 0.42
RFC2P35250 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFC2P35250 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RFC2P35250 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC2P35250 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.69■□□□□ 0.42
RFC2P35250 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC2P35250 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 AC092552.1-201ENST00000547243 906 ntBASIC17.69■□□□□ 0.42
RFC2P35250 SNX29P1-201ENST00000548357 1007 ntBASIC17.69■□□□□ 0.42
RFC2P35250 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.69■□□□□ 0.42
RFC2P35250 BTNL10-201ENST00000595971 695 ntBASIC17.69■□□□□ 0.42
RFC2P35250 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFC2P35250 AL606495.2-201ENST00000605867 535 ntBASIC17.69■□□□□ 0.42
RFC2P35250 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.69■□□□□ 0.42
RFC2P35250 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 AL512652.2-201ENST00000625156 1716 ntBASIC17.69■□□□□ 0.42
RFC2P35250 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.69■□□□□ 0.42
RFC2P35250 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 CLK3P2-201ENST00000427566 1453 ntBASIC17.69■□□□□ 0.42
RFC2P35250 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFC2P35250 GPAA1P2-202ENST00000606848 1787 ntBASIC17.68■□□□□ 0.42
RFC2P35250 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RFC2P35250 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.68■□□□□ 0.42
RFC2P35250 FAM8A2P-201ENST00000528813 1142 ntBASIC17.68■□□□□ 0.42
RFC2P35250 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.68■□□□□ 0.42
RFC2P35250 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.68■□□□□ 0.42
RFC2P35250 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.68■□□□□ 0.42
RFC2P35250 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.68■□□□□ 0.42
RFC2P35250 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.68■□□□□ 0.42
RFC2P35250 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFC2P35250 REXO1L6P-201ENST00000603433 1515 ntBASIC17.67■□□□□ 0.42
RFC2P35250 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 AL391256.1-201ENST00000443260 1855 ntBASIC17.67■□□□□ 0.42
RFC2P35250 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 AC092053.1-201ENST00000605787 1936 ntBASIC17.67■□□□□ 0.42
RFC2P35250 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 FAM86MP-201ENST00000340703 885 ntBASIC17.67■□□□□ 0.42
RFC2P35250 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFC2P35250 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFC2P35250 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.67■□□□□ 0.42
RFC2P35250 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.67■□□□□ 0.42
RFC2P35250 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms