Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A4P31645 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A4P31645 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A4P31645 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A4P31645 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 MIR943-201ENST00000401286 94 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 TREML5P-201ENST00000421694 576 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC6A4P31645 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A4P31645 BANF1P1-201ENST00000553684 263 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 AC140878.1-201ENST00000565277 250 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 AC061975.2-201ENST00000581722 295 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A4P31645 AC007967.4-201ENST00000614700 386 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 FO538757.1-201ENST00000623083 1397 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A4P31645 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 ME2P1-201ENST00000426028 1970 ntBASIC16.84■□□□□ 0.29
SLC6A4P31645 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A4P31645 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A4P31645 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A4P31645 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A4P31645 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A4P31645 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A4P31645 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A4P31645 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLC6A4P31645 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A4P31645 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A4P31645 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SLC6A4P31645 PRORSD1P-202ENST00000563365 2154 ntBASIC16.83■□□□□ 0.28
SLC6A4P31645 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A4P31645 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SLC6A4P31645 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 AC055876.3-201ENST00000431496 288 ntBASIC16.82■□□□□ 0.28
SLC6A4P31645 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A4P31645 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC6A4P31645 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A4P31645 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A4P31645 AC138649.4-201ENST00000612222 287 ntBASIC16.82■□□□□ 0.28
SLC6A4P31645 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A4P31645 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 PCDHA14-201ENST00000506751 2298 ntBASIC16.82■□□□□ 0.28
SLC6A4P31645 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A4P31645 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms