Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NCK1P16333 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.62■□□□□ 0.09
NCK1P16333 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NCK1P16333 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.62■□□□□ 0.09
NCK1P16333 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.62■□□□□ 0.09
NCK1P16333 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.62■□□□□ 0.09
NCK1P16333 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NCK1P16333 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NCK1P16333 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NCK1P16333 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCK1P16333 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.61■□□□□ 0.09
NCK1P16333 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.61■□□□□ 0.09
NCK1P16333 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 POU5F1P6-201ENST00000466990 990 ntBASIC15.61■□□□□ 0.09
NCK1P16333 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.61■□□□□ 0.09
NCK1P16333 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.61■□□□□ 0.09
NCK1P16333 AC074051.2-201ENST00000565115 352 ntBASIC15.61■□□□□ 0.09
NCK1P16333 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.61■□□□□ 0.09
NCK1P16333 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.61■□□□□ 0.09
NCK1P16333 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 AP002414.4-201ENST00000589764 1148 ntBASIC15.61■□□□□ 0.09
NCK1P16333 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.61■□□□□ 0.09
NCK1P16333 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.61■□□□□ 0.09
NCK1P16333 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCK1P16333 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NCK1P16333 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NCK1P16333 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.6■□□□□ 0.09
NCK1P16333 AC069224.1-201ENST00000566372 1715 ntBASIC15.6■□□□□ 0.09
NCK1P16333 LINC01144-201ENST00000626198 1710 ntBASIC15.6■□□□□ 0.09
NCK1P16333 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.6■□□□□ 0.09
NCK1P16333 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
NCK1P16333 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
NCK1P16333 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.6■□□□□ 0.09
NCK1P16333 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms