Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 AL645939.2-201ENST00000427340 991 ntBASIC19.34■□□□□ 0.69
TOP1P11387 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.34■□□□□ 0.69
TOP1P11387 AC027796.2-201ENST00000575326 344 ntBASIC19.34■□□□□ 0.69
TOP1P11387 AC020765.3-201ENST00000613051 740 ntBASIC19.34■□□□□ 0.69
TOP1P11387 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.34■□□□□ 0.69
TOP1P11387 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.34■□□□□ 0.69
TOP1P11387 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.34■□□□□ 0.69
TOP1P11387 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TOP1P11387 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TOP1P11387 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TOP1P11387 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.33■□□□□ 0.69
TOP1P11387 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.33■□□□□ 0.69
TOP1P11387 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TOP1P11387 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP1P11387 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TOP1P11387 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP1P11387 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP1P11387 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.33■□□□□ 0.68
TOP1P11387 AC142381.1-201ENST00000426099 345 ntBASIC19.33■□□□□ 0.68
TOP1P11387 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP1P11387 RBPMS2P1-201ENST00000437762 623 ntBASIC19.33■□□□□ 0.68
TOP1P11387 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP1P11387 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TOP1P11387 AC025678.2-201ENST00000562061 970 ntBASIC19.33■□□□□ 0.68
TOP1P11387 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP1P11387 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP1P11387 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP1P11387 AC073439.1-201ENST00000624121 1774 ntBASIC19.33■□□□□ 0.68
TOP1P11387 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOP1P11387 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.33■□□□□ 0.68
TOP1P11387 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
TOP1P11387 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.33■□□□□ 0.68
TOP1P11387 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP1P11387 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
TOP1P11387 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TOP1P11387 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP1P11387 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.33■□□□□ 0.68
TOP1P11387 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOP1P11387 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOP1P11387 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.33■□□□□ 0.68
TOP1P11387 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.32■□□□□ 0.68
TOP1P11387 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TOP1P11387 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.32■□□□□ 0.68
TOP1P11387 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TOP1P11387 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.32■□□□□ 0.68
TOP1P11387 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.32■□□□□ 0.68
TOP1P11387 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.32■□□□□ 0.68
TOP1P11387 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 AP001059.3-201ENST00000619053 235 ntBASIC19.32■□□□□ 0.68
TOP1P11387 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.32■□□□□ 0.68
TOP1P11387 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TOP1P11387 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP1P11387 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP1P11387 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP1P11387 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP1P11387 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP1P11387 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms