Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RETP07949 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.58■□□□□ 0.25
RETP07949 AL139384.1-201ENST00000612143 3047 ntBASIC16.58■□□□□ 0.24
RETP07949 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.58■□□□□ 0.24
RETP07949 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.58■□□□□ 0.24
RETP07949 AC142381.1-201ENST00000426099 345 ntBASIC16.58■□□□□ 0.24
RETP07949 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.58■□□□□ 0.24
RETP07949 AC105233.2-201ENST00000523697 349 ntBASIC16.58■□□□□ 0.24
RETP07949 AF228730.5-201ENST00000530288 346 ntBASIC16.58■□□□□ 0.24
RETP07949 AC132938.2-201ENST00000579188 680 ntBASIC16.58■□□□□ 0.24
RETP07949 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.58■□□□□ 0.24
RETP07949 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.58■□□□□ 0.24
RETP07949 AL139327.4-201ENST00000612362 153 ntBASIC16.58■□□□□ 0.24
RETP07949 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.58■□□□□ 0.24
RETP07949 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.58■□□□□ 0.24
RETP07949 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.58■□□□□ 0.24
RETP07949 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.58■□□□□ 0.24
RETP07949 AL591163.1-201ENST00000641757 987 ntBASIC16.58■□□□□ 0.24
RETP07949 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.58■□□□□ 0.24
RETP07949 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.58■□□□□ 0.24
RETP07949 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RETP07949 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RETP07949 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.58■□□□□ 0.24
RETP07949 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RETP07949 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.58■□□□□ 0.24
RETP07949 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RETP07949 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 AC105020.1-201ENST00000435356 2205 ntBASIC16.57■□□□□ 0.24
RETP07949 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 AC060834.1-201ENST00000443027 2032 ntBASIC16.57■□□□□ 0.24
RETP07949 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
RETP07949 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RETP07949 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 AC116353.5-201ENST00000638148 1699 ntBASIC16.57■□□□□ 0.24
RETP07949 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RETP07949 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RETP07949 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.57■□□□□ 0.24
RETP07949 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.57■□□□□ 0.24
RETP07949 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.57■□□□□ 0.24
RETP07949 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.57■□□□□ 0.24
RETP07949 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
RETP07949 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.57■□□□□ 0.24
RETP07949 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.57■□□□□ 0.24
RETP07949 LYSMD4-203ENST00000378904 2122 ntBASIC16.57■□□□□ 0.24
RETP07949 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RETP07949 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RETP07949 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.56■□□□□ 0.24
RETP07949 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RETP07949 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.56■□□□□ 0.24
RETP07949 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.56■□□□□ 0.24
RETP07949 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.56■□□□□ 0.24
RETP07949 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RETP07949 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms