Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.29■□□□□ 0.2
PCCBP05166 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCCBP05166 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCCBP05166 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCCBP05166 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCCBP05166 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 GGT3P-204ENST00000453783 1664 ntBASIC16.28■□□□□ 0.2
PCCBP05166 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.28■□□□□ 0.2
PCCBP05166 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.28■□□□□ 0.2
PCCBP05166 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.28■□□□□ 0.2
PCCBP05166 AC140878.1-201ENST00000565277 250 ntBASIC16.28■□□□□ 0.2
PCCBP05166 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.28■□□□□ 0.2
PCCBP05166 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.28■□□□□ 0.2
PCCBP05166 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCCBP05166 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
PCCBP05166 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.27■□□□□ 0.2
PCCBP05166 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.27■□□□□ 0.2
PCCBP05166 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.27■□□□□ 0.2
PCCBP05166 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.27■□□□□ 0.2
PCCBP05166 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.27■□□□□ 0.2
PCCBP05166 AC069120.2-201ENST00000524091 540 ntBASIC16.27■□□□□ 0.2
PCCBP05166 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.27■□□□□ 0.2
PCCBP05166 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.27■□□□□ 0.2
PCCBP05166 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCCBP05166 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCCBP05166 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCCBP05166 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.27■□□□□ 0.19
PCCBP05166 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.19
PCCBP05166 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PCCBP05166 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCCBP05166 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PCCBP05166 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCCBP05166 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCCBP05166 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 AC092171.3-201ENST00000610122 2651 ntBASIC16.26■□□□□ 0.19
PCCBP05166 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
PCCBP05166 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.26■□□□□ 0.19
PCCBP05166 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.26■□□□□ 0.19
PCCBP05166 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCCBP05166 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.26■□□□□ 0.19
PCCBP05166 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.26■□□□□ 0.19
PCCBP05166 FAM220BP-201ENST00000377689 816 ntBASIC16.26■□□□□ 0.19
PCCBP05166 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCCBP05166 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.26■□□□□ 0.19
PCCBP05166 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.26■□□□□ 0.19
PCCBP05166 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.26■□□□□ 0.19
PCCBP05166 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.26■□□□□ 0.19
PCCBP05166 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.26■□□□□ 0.19
PCCBP05166 AL390754.1-201ENST00000619088 582 ntBASIC16.26■□□□□ 0.19
PCCBP05166 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.26■□□□□ 0.19
PCCBP05166 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCCBP05166 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCCBP05166 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PCCBP05166 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
PCCBP05166 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms