Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P04436 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.03■□□□□ -0
P04436 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.03■□□□□ -0
P04436 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.03■□□□□ -0
P04436 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
P04436 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.03■□□□□ -0
P04436 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
P04436 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.03■□□□□ -0
P04436 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.03■□□□□ -0
P04436 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.03■□□□□ -0
P04436 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.03■□□□□ -0
P04436 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.03■□□□□ -0
P04436 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
P04436 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
P04436 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
P04436 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
P04436 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P04436 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.03■□□□□ -0
P04436 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.03■□□□□ -0
P04436 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
P04436 AC008677.1-201ENST00000519230 1561 ntBASIC15.02■□□□□ -0
P04436 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.02■□□□□ -0
P04436 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.02■□□□□ -0
P04436 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
P04436 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
P04436 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.02■□□□□ -0
P04436 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
P04436 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.02■□□□□ -0
P04436 AC078925.2-201ENST00000624013 1973 ntBASIC15.02■□□□□ -0
P04436 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P04436 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P04436 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.02■□□□□ -0
P04436 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.02■□□□□ -0
P04436 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P04436 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.02■□□□□ -0
P04436 RNF216P1-203ENST00000404404 2427 ntBASIC15.02■□□□□ -0
P04436 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
P04436 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
P04436 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
P04436 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
P04436 MIR770-201ENST00000390219 98 ntBASIC15.02■□□□□ -0
P04436 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.02■□□□□ -0
P04436 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.02■□□□□ -0
P04436 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.02■□□□□ -0
P04436 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.02■□□□□ -0
P04436 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.02■□□□□ -0
P04436 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.02■□□□□ -0
P04436 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
P04436 RNA5SP410-201ENST00000516285 106 ntBASIC15.02■□□□□ -0
P04436 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.02■□□□□ -0
P04436 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
P04436 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.02■□□□□ -0
P04436 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.02■□□□□ -0
P04436 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.02■□□□□ -0
P04436 AC003101.2-201ENST00000612557 442 ntBASIC15.02■□□□□ -0
P04436 AC018529.1-201ENST00000613063 361 ntBASIC15.02■□□□□ -0
P04436 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.02■□□□□ -0
P04436 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
P04436 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.02□□□□□ -0.01
P04436 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04436 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04436 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
P04436 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04436 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.02□□□□□ -0.01
P04436 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
P04436 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
P04436 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
P04436 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.01□□□□□ -0.01
P04436 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 HLA-A-202ENST00000376806 1854 ntBASIC15.01□□□□□ -0.01
P04436 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.01□□□□□ -0.01
P04436 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.01□□□□□ -0.01
P04436 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
P04436 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.01□□□□□ -0.01
P04436 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 LINC01144-201ENST00000626198 1710 ntBASIC15.01□□□□□ -0.01
P04436 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
P04436 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
P04436 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.01□□□□□ -0.01
P04436 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
P04436 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04436 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.01□□□□□ -0.01
P04436 AC107890.1-201ENST00000422478 521 ntBASIC15.01□□□□□ -0.01
P04436 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.01□□□□□ -0.01
P04436 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.01□□□□□ -0.01
P04436 HMGN1P19-201ENST00000436976 333 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms