Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.27■□□□□ 0.03
CLIC3O95833 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 AC148477.5-201ENST00000625164 1645 ntBASIC15.27■□□□□ 0.03
CLIC3O95833 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.27■□□□□ 0.03
CLIC3O95833 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.27■□□□□ 0.03
CLIC3O95833 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 AC007686.3-201ENST00000619017 3487 ntBASIC15.27■□□□□ 0.03
CLIC3O95833 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.27■□□□□ 0.03
CLIC3O95833 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CLIC3O95833 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLIC3O95833 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.27■□□□□ 0.03
CLIC3O95833 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.26■□□□□ 0.03
CLIC3O95833 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
CLIC3O95833 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLIC3O95833 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
CLIC3O95833 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.26■□□□□ 0.03
CLIC3O95833 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.26■□□□□ 0.03
CLIC3O95833 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLIC3O95833 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
CLIC3O95833 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CLIC3O95833 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CLIC3O95833 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLIC3O95833 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.26■□□□□ 0.03
CLIC3O95833 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLIC3O95833 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLIC3O95833 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 AL845331.1-201ENST00000424978 1190 ntBASIC15.25■□□□□ 0.03
CLIC3O95833 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.25■□□□□ 0.03
CLIC3O95833 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.25■□□□□ 0.03
CLIC3O95833 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.25■□□□□ 0.03
CLIC3O95833 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLIC3O95833 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLIC3O95833 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.25■□□□□ 0.03
CLIC3O95833 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms