Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.56■□□□□ 0.24
RFPL1O75677 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 MTDHP4-201ENST00000600287 670 ntBASIC16.56■□□□□ 0.24
RFPL1O75677 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFPL1O75677 AC079781.4-201ENST00000641908 219 ntBASIC16.56■□□□□ 0.24
RFPL1O75677 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 CROCCP1-201ENST00000426910 5675 ntBASIC16.56■□□□□ 0.24
RFPL1O75677 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RFPL1O75677 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 LINC02447-202ENST00000501888 2146 ntBASIC16.55■□□□□ 0.24
RFPL1O75677 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 GPX1P2-201ENST00000429271 606 ntBASIC16.55■□□□□ 0.24
RFPL1O75677 RNA5SP416-201ENST00000516838 111 ntBASIC16.55■□□□□ 0.24
RFPL1O75677 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.55■□□□□ 0.24
RFPL1O75677 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 AC107918.4-202ENST00000641623 219 ntBASIC16.55■□□□□ 0.24
RFPL1O75677 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.55■□□□□ 0.24
RFPL1O75677 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
RFPL1O75677 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFPL1O75677 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFPL1O75677 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.54■□□□□ 0.24
RFPL1O75677 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.54■□□□□ 0.24
RFPL1O75677 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RFPL1O75677 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.54■□□□□ 0.24
RFPL1O75677 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.54■□□□□ 0.24
RFPL1O75677 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.54■□□□□ 0.24
RFPL1O75677 LAGE3P1-201ENST00000425356 484 ntBASIC16.54■□□□□ 0.24
RFPL1O75677 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.54■□□□□ 0.24
RFPL1O75677 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.54■□□□□ 0.24
RFPL1O75677 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.54■□□□□ 0.24
RFPL1O75677 AC107918.2-201ENST00000530817 355 ntBASIC16.54■□□□□ 0.24
RFPL1O75677 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.54■□□□□ 0.24
RFPL1O75677 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 AC055717.3-201ENST00000622967 595 ntBASIC16.54■□□□□ 0.24
RFPL1O75677 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.54■□□□□ 0.24
RFPL1O75677 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RFPL1O75677 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms