Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
GPC4O75487 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GPC4O75487 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
GPC4O75487 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.57■□□□□ 0.24
GPC4O75487 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 AC104109.2-201ENST00000602919 1418 ntBASIC16.57■□□□□ 0.24
GPC4O75487 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.57■□□□□ 0.24
GPC4O75487 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.57■□□□□ 0.24
GPC4O75487 MIR4751-201ENST00000578027 74 ntBASIC16.57■□□□□ 0.24
GPC4O75487 MIR4492-201ENST00000581627 80 ntBASIC16.57■□□□□ 0.24
GPC4O75487 MPDU1-223ENST00000582151 728 ntBASIC16.57■□□□□ 0.24
GPC4O75487 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.57■□□□□ 0.24
GPC4O75487 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GPC4O75487 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.57■□□□□ 0.24
GPC4O75487 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GPC4O75487 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 HLA-A-202ENST00000376806 1854 ntBASIC16.56■□□□□ 0.24
GPC4O75487 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 AC006277.1-201ENST00000624348 1610 ntBASIC16.56■□□□□ 0.24
GPC4O75487 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 AC092364.2-201ENST00000596710 2692 ntBASIC16.56■□□□□ 0.24
GPC4O75487 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.56■□□□□ 0.24
GPC4O75487 CRYGEP-201ENST00000412192 528 ntBASIC16.56■□□□□ 0.24
GPC4O75487 IGLL3P-201ENST00000412472 434 ntBASIC16.56■□□□□ 0.24
GPC4O75487 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 HCG4B-203ENST00000450128 991 ntBASIC16.56■□□□□ 0.24
GPC4O75487 SLC25A1P1-201ENST00000528351 927 ntBASIC16.56■□□□□ 0.24
GPC4O75487 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.56■□□□□ 0.24
GPC4O75487 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 AC091167.2-201ENST00000579581 588 ntBASIC16.56■□□□□ 0.24
GPC4O75487 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 ACTL9-202ENST00000612068 1252 ntBASIC16.56■□□□□ 0.24
GPC4O75487 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 AL391256.1-201ENST00000443260 1855 ntBASIC16.56■□□□□ 0.24
GPC4O75487 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms