Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SH2D1AO60880 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 AL136038.3-201ENST00000561909 1096 ntBASIC12.37□□□□□ -0.43
SH2D1AO60880 LINC01238-205ENST00000567549 1107 ntBASIC12.37□□□□□ -0.43
SH2D1AO60880 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.37□□□□□ -0.43
SH2D1AO60880 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 MPDU1-223ENST00000582151 728 ntBASIC12.37□□□□□ -0.43
SH2D1AO60880 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.37□□□□□ -0.43
SH2D1AO60880 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 GPAA1P2-202ENST00000606848 1787 ntBASIC12.37□□□□□ -0.43
SH2D1AO60880 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.37□□□□□ -0.43
SH2D1AO60880 AC013268.4-201ENST00000637413 2228 ntBASIC12.37□□□□□ -0.43
SH2D1AO60880 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.37□□□□□ -0.43
SH2D1AO60880 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SH2D1AO60880 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.36□□□□□ -0.43
SH2D1AO60880 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.36□□□□□ -0.43
SH2D1AO60880 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.36□□□□□ -0.43
SH2D1AO60880 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.36□□□□□ -0.43
SH2D1AO60880 MIR4492-201ENST00000581627 80 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.36□□□□□ -0.43
SH2D1AO60880 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 AC010331.1-201ENST00000611423 582 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 NSUN5P1-202ENST00000421140 1535 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 NSUN5P2-203ENST00000457352 1529 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 KRT18P1-202ENST00000452408 1331 ntBASIC12.36□□□□□ -0.43
SH2D1AO60880 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.36□□□□□ -0.43
SH2D1AO60880 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SH2D1AO60880 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
SH2D1AO60880 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms