Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 OR7E47P-204ENST00000575924 449 ntBASIC16.44■□□□□ 0.22
PHGDHO43175 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHGDHO43175 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHGDHO43175 AC148477.8-201ENST00000624298 468 ntBASIC16.44■□□□□ 0.22
PHGDHO43175 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.44■□□□□ 0.22
PHGDHO43175 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHGDHO43175 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHGDHO43175 MST1L-201ENST00000442552 2185 ntBASIC16.44■□□□□ 0.22
PHGDHO43175 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.44■□□□□ 0.22
PHGDHO43175 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.44■□□□□ 0.22
PHGDHO43175 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PHGDHO43175 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.43■□□□□ 0.22
PHGDHO43175 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 AC108073.2-201ENST00000464002 357 ntBASIC16.43■□□□□ 0.22
PHGDHO43175 POU5F1P6-201ENST00000466990 990 ntBASIC16.43■□□□□ 0.22
PHGDHO43175 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.43■□□□□ 0.22
PHGDHO43175 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 AL121912.1-201ENST00000603683 238 ntBASIC16.43■□□□□ 0.22
PHGDHO43175 AC010654.1-201ENST00000615722 808 ntBASIC16.43■□□□□ 0.22
PHGDHO43175 AC004790.2-201ENST00000623588 572 ntBASIC16.43■□□□□ 0.22
PHGDHO43175 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 LINC00554-201ENST00000564841 3011 ntBASIC16.43■□□□□ 0.22
PHGDHO43175 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PHGDHO43175 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.43■□□□□ 0.22
PHGDHO43175 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHGDHO43175 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 MRPL20P1-201ENST00000400819 433 ntBASIC16.42■□□□□ 0.22
PHGDHO43175 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.42■□□□□ 0.22
PHGDHO43175 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.42■□□□□ 0.22
PHGDHO43175 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 AC005593.1-201ENST00000624894 515 ntBASIC16.42■□□□□ 0.22
PHGDHO43175 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.42■□□□□ 0.22
PHGDHO43175 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHGDHO43175 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PHGDHO43175 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms