Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MID1O15344 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MID1O15344 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MID1O15344 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.45■□□□□ 0.22
MID1O15344 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MID1O15344 AL589702.1-201ENST00000641229 1509 ntBASIC16.45■□□□□ 0.22
MID1O15344 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
MID1O15344 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.45■□□□□ 0.22
MID1O15344 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MID1O15344 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MID1O15344 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.44■□□□□ 0.22
MID1O15344 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 AC022144.1-201ENST00000602255 1580 ntBASIC16.44■□□□□ 0.22
MID1O15344 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 RPL37AP1-201ENST00000412502 279 ntBASIC16.44■□□□□ 0.22
MID1O15344 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.44■□□□□ 0.22
MID1O15344 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MID1O15344 HLA-J-202ENST00000469281 1241 ntBASIC16.44■□□□□ 0.22
MID1O15344 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 SERBP1P5-201ENST00000510079 1181 ntBASIC16.44■□□□□ 0.22
MID1O15344 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 TEX28P1-201ENST00000613479 1221 ntBASIC16.44■□□□□ 0.22
MID1O15344 TEX28P2-201ENST00000617764 1221 ntBASIC16.44■□□□□ 0.22
MID1O15344 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MID1O15344 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.44■□□□□ 0.22
MID1O15344 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
MID1O15344 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MID1O15344 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.43■□□□□ 0.22
MID1O15344 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MID1O15344 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
MID1O15344 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MID1O15344 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MID1O15344 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.43■□□□□ 0.22
MID1O15344 AC015922.1-201ENST00000421102 1152 ntBASIC16.43■□□□□ 0.22
MID1O15344 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.43■□□□□ 0.22
MID1O15344 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.43■□□□□ 0.22
MID1O15344 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.43■□□□□ 0.22
MID1O15344 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
MID1O15344 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.43■□□□□ 0.22
MID1O15344 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MID1O15344 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MID1O15344 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
MID1O15344 RNF216P1-203ENST00000404404 2427 ntBASIC16.43■□□□□ 0.22
MID1O15344 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.42■□□□□ 0.22
MID1O15344 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MID1O15344 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.42■□□□□ 0.22
MID1O15344 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MID1O15344 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
MID1O15344 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms