Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.69■□□□□ 0.74
SEMA3EO15041 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.69■□□□□ 0.74
SEMA3EO15041 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.69■□□□□ 0.74
SEMA3EO15041 AL592424.1-201ENST00000563624 1536 ntBASIC19.69■□□□□ 0.74
SEMA3EO15041 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SEMA3EO15041 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SEMA3EO15041 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SEMA3EO15041 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SEMA3EO15041 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.68■□□□□ 0.74
SEMA3EO15041 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SEMA3EO15041 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 PIN1P1-201ENST00000412108 996 ntBASIC19.68■□□□□ 0.74
SEMA3EO15041 AC015922.1-201ENST00000421102 1152 ntBASIC19.68■□□□□ 0.74
SEMA3EO15041 CRB3P1-201ENST00000449338 276 ntBASIC19.68■□□□□ 0.74
SEMA3EO15041 AC245100.5-201ENST00000452108 331 ntBASIC19.68■□□□□ 0.74
SEMA3EO15041 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 AL512361.1-201ENST00000554200 418 ntBASIC19.68■□□□□ 0.74
SEMA3EO15041 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.68■□□□□ 0.74
SEMA3EO15041 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEMA3EO15041 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 OR6D1P-202ENST00000641007 5290 ntBASIC19.67■□□□□ 0.74
SEMA3EO15041 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA3EO15041 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA3EO15041 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SEMA3EO15041 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA3EO15041 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SEMA3EO15041 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SEMA3EO15041 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.67■□□□□ 0.74
SEMA3EO15041 AF228730.6-201ENST00000641497 218 ntBASIC19.67■□□□□ 0.74
SEMA3EO15041 AL033527.5-202ENST00000641632 1098 ntBASIC19.67■□□□□ 0.74
SEMA3EO15041 AC084121.3-201ENST00000641716 218 ntBASIC19.67■□□□□ 0.74
SEMA3EO15041 AC105233.6-201ENST00000642093 218 ntBASIC19.67■□□□□ 0.74
SEMA3EO15041 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SEMA3EO15041 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SEMA3EO15041 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SEMA3EO15041 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA3EO15041 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.67■□□□□ 0.74
SEMA3EO15041 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SEMA3EO15041 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SEMA3EO15041 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SEMA3EO15041 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA3EO15041 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA3EO15041 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SEMA3EO15041 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.66■□□□□ 0.74
SEMA3EO15041 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.66■□□□□ 0.74
SEMA3EO15041 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.66■□□□□ 0.74
SEMA3EO15041 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SEMA3EO15041 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms