Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ATP2A1O14983 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP2A1O14983 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP2A1O14983 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ATP2A1O14983 CR383656.12-201ENST00000549567 513 ntBASIC18.77■□□□□ 0.6
ATP2A1O14983 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ATP2A1O14983 AC004840.1-201ENST00000636359 365 ntBASIC18.77■□□□□ 0.6
ATP2A1O14983 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP2A1O14983 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A1O14983 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATP2A1O14983 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2A1O14983 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2A1O14983 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2A1O14983 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP2A1O14983 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2A1O14983 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2A1O14983 AC026979.3-201ENST00000607315 403 ntBASIC18.76■□□□□ 0.59
ATP2A1O14983 AC004233.3-201ENST00000607794 1269 ntBASIC18.76■□□□□ 0.59
ATP2A1O14983 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A1O14983 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A1O14983 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATP2A1O14983 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP2A1O14983 AL645608.8-201ENST00000606034 2086 ntBASIC18.75■□□□□ 0.59
ATP2A1O14983 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP2A1O14983 AL603756.1-201ENST00000606511 2163 ntBASIC18.75■□□□□ 0.59
ATP2A1O14983 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ATP2A1O14983 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.75■□□□□ 0.59
ATP2A1O14983 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ATP2A1O14983 AC010336.2-201ENST00000564226 506 ntBASIC18.75■□□□□ 0.59
ATP2A1O14983 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
ATP2A1O14983 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 KRT8P12-202ENST00000472924 1397 ntBASIC18.75■□□□□ 0.59
ATP2A1O14983 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ATP2A1O14983 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP2A1O14983 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATP2A1O14983 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP2A1O14983 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP2A1O14983 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP2A1O14983 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ATP2A1O14983 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms