Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
UPK2O00526 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
UPK2O00526 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
UPK2O00526 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.24□□□□□ -0.29
UPK2O00526 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 AC108073.2-201ENST00000464002 357 ntBASIC13.24□□□□□ -0.29
UPK2O00526 KRT18P56-201ENST00000507275 550 ntBASIC13.24□□□□□ -0.29
UPK2O00526 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK2O00526 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK2O00526 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.24□□□□□ -0.29
UPK2O00526 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 AC012640.2-201ENST00000561606 901 ntBASIC13.24□□□□□ -0.29
UPK2O00526 OR7E47P-204ENST00000575924 449 ntBASIC13.24□□□□□ -0.29
UPK2O00526 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.24□□□□□ -0.29
UPK2O00526 AL121912.1-201ENST00000603683 238 ntBASIC13.24□□□□□ -0.29
UPK2O00526 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.24□□□□□ -0.29
UPK2O00526 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK2O00526 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
UPK2O00526 PAUPAR-201ENST00000630360 2965 ntBASIC13.24□□□□□ -0.29
UPK2O00526 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
UPK2O00526 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 AC005622.1-201ENST00000636801 1703 ntBASIC13.24□□□□□ -0.29
UPK2O00526 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.24□□□□□ -0.29
UPK2O00526 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK2O00526 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 AC132872.4-202ENST00000622924 2756 ntBASIC13.24□□□□□ -0.29
UPK2O00526 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK2O00526 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK2O00526 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
UPK2O00526 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 MIR648-201ENST00000385046 94 ntBASIC13.23□□□□□ -0.29
UPK2O00526 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.23□□□□□ -0.29
UPK2O00526 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 KRT18P67-201ENST00000432816 1264 ntBASIC13.23□□□□□ -0.29
UPK2O00526 EMBP1-201ENST00000458200 901 ntBASIC13.23□□□□□ -0.29
UPK2O00526 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.23□□□□□ -0.29
UPK2O00526 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 AC021097.1-201ENST00000607902 574 ntBASIC13.23□□□□□ -0.29
UPK2O00526 ACTL9-202ENST00000612068 1252 ntBASIC13.23□□□□□ -0.29
UPK2O00526 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.23□□□□□ -0.29
UPK2O00526 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK2O00526 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 AC010491.1-201ENST00000563101 2797 ntBASIC13.23□□□□□ -0.29
UPK2O00526 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms