Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.71□□□□□ -0.22
AP4M1O00189 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.71□□□□□ -0.22
AP4M1O00189 CICP14-201ENST00000629111 2732 ntBASIC13.7□□□□□ -0.22
AP4M1O00189 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 AC006058.4-201ENST00000624016 1670 ntBASIC13.7□□□□□ -0.22
AP4M1O00189 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.7□□□□□ -0.22
AP4M1O00189 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.7□□□□□ -0.22
AP4M1O00189 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.7□□□□□ -0.22
AP4M1O00189 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 AC079776.4-201ENST00000511039 504 ntBASIC13.7□□□□□ -0.22
AP4M1O00189 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP4M1O00189 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP4M1O00189 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
AP4M1O00189 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.7□□□□□ -0.22
AP4M1O00189 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP4M1O00189 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.69□□□□□ -0.22
AP4M1O00189 AC060834.1-201ENST00000443027 2032 ntBASIC13.69□□□□□ -0.22
AP4M1O00189 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.69□□□□□ -0.22
AP4M1O00189 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 AC004817.3-201ENST00000602957 2129 ntBASIC13.69□□□□□ -0.22
AP4M1O00189 TNRC18P2-201ENST00000417666 2714 ntBASIC13.69□□□□□ -0.22
AP4M1O00189 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.69□□□□□ -0.22
AP4M1O00189 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.69□□□□□ -0.22
AP4M1O00189 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
AP4M1O00189 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.69□□□□□ -0.22
AP4M1O00189 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 MIR1199-201ENST00000621445 119 ntBASIC13.69□□□□□ -0.22
AP4M1O00189 AC008735.5-201ENST00000623544 497 ntBASIC13.69□□□□□ -0.22
AP4M1O00189 FAM215A-202ENST00000632077 792 ntBASIC13.69□□□□□ -0.22
AP4M1O00189 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
AP4M1O00189 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4M1O00189 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4M1O00189 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4M1O00189 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4M1O00189 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP4M1O00189 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms