Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC188H7C350 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC188H7C350 AC139887.3-201ENST00000568585 713 ntBASIC17.16■□□□□ 0.34
CCDC188H7C350 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC188H7C350 AC092919.2-201ENST00000623631 1645 ntBASIC17.16■□□□□ 0.34
CCDC188H7C350 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC188H7C350 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC188H7C350 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC188H7C350 PI4KAP1-204ENST00000612579 1703 ntBASIC17.16■□□□□ 0.34
CCDC188H7C350 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC188H7C350 PTCHD3P3-201ENST00000403073 906 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 KRT16P4-201ENST00000453883 522 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 AC132008.2-207ENST00000454517 770 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC188H7C350 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC188H7C350 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC188H7C350 AC005412.3-201ENST00000580309 715 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 AC004706.3-202ENST00000621574 984 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 AC023157.3-201ENST00000619086 2088 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.15■□□□□ 0.34
CCDC188H7C350 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC188H7C350 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CCDC188H7C350 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC188H7C350 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.14■□□□□ 0.34
CCDC188H7C350 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC188H7C350 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC188H7C350 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CCDC188H7C350 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC188H7C350 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC188H7C350 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC188H7C350 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CCDC188H7C350 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC188H7C350 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 RBM17P3-201ENST00000417687 1192 ntBASIC17.14■□□□□ 0.33
CCDC188H7C350 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC188H7C350 TMPOP1-202ENST00000424642 1267 ntBASIC17.14■□□□□ 0.33
CCDC188H7C350 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC188H7C350 AC107918.2-201ENST00000530817 355 ntBASIC17.14■□□□□ 0.33
CCDC188H7C350 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC188H7C350 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC188H7C350 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC188H7C350 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC188H7C350 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC188H7C350 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC188H7C350 AC068418.2-201ENST00000577309 3703 ntBASIC17.14■□□□□ 0.33
CCDC188H7C350 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC188H7C350 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC188H7C350 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC188H7C350 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms