Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 REXO1L8P-201ENST00000604378 1897 ntBASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 U82695.1-201ENST00000635752 1889 ntBASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 FAM220BP-201ENST00000377689 816 ntBASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 PMS2P2-201ENST00000425039 1128 ntBASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 AL512356.2-201ENST00000546955 174 ntBASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YJEFN3A6XGL0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 HLA-H-201ENST00000383620 1096 ntBASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.11■□□□□ 0.33
YJEFN3A6XGL0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms