Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV5A0A0B4J249 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 CDC14C-201ENST00000428251 1719 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 POM121L3P-201ENST00000419331 1163 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 AP000867.3-201ENST00000524675 377 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MIR5100-201ENST00000579544 119 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MIR4492-201ENST00000581627 80 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 PCGF3-213ENST00000620529 1899 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 LINC02447-202ENST00000501888 2146 ntBASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV5A0A0B4J249 AC112504.1-201ENST00000623415 1841 ntBASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 AC013268.4-201ENST00000637413 2228 ntBASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms