Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.96□□□□□ -0.34
TSSC4Q9Y5U2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 TUBB3P1-201ENST00000405796 1332 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PCDHA1-201ENST00000378133 2726 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 FAM58DP-201ENST00000428076 619 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 RNA5SP421-201ENST00000516864 134 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AC069262.1-201ENST00000539058 672 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 SPCS2P1-201ENST00000561636 679 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 LINC01225-203ENST00000563550 1244 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AC027307.2-201ENST00000591252 911 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 LINC02012-201ENST00000608206 1725 ntBASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSSC4Q9Y5U2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 AC016027.1-202ENST00000607927 1699 ntBASIC12.94□□□□□ -0.34
TSSC4Q9Y5U2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms