Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI2Q9Y5P3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 ME2P1-201ENST00000426028 1970 ntBASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 AC243562.1-201ENST00000560672 389 ntBASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 AC004449.1-201ENST00000564240 433 ntBASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAI2Q9Y5P3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 AC079140.1-201ENST00000508039 487 ntBASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 AC105339.1-204ENST00000636249 355 ntBASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI2Q9Y5P3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
RAI2Q9Y5P3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms