Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 AC009947.1-201ENST00000444350 727 ntBASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 IGHV3-22-201ENST00000520721 359 ntBASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA11Q9Y5H2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 HLA-A-201ENST00000376802 1334 ntBASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 RNA5SP415-201ENST00000517246 115 ntBASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 AL645728.2-201ENST00000641974 660 ntBASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA11Q9Y5H2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA11Q9Y5H2 LINC01144-201ENST00000626198 1710 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms