Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 AL135744.1-201ENST00000565098 629 ntBASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 ELL2P1-201ENST00000413990 1906 ntBASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDGFL3Q9Y3E1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 ADH5P3-201ENST00000433842 1137 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SPDYE11-202ENST00000450699 704 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 ALG1L5P-201ENST00000482043 771 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 YBX1P5-201ENST00000509441 847 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SPDYE9P-201ENST00000570642 692 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 AC026120.1-201ENST00000611536 926 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SPDYE10P-202ENST00000612005 668 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SPDYE8P-202ENST00000612377 668 ntBASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HDGFL3Q9Y3E1 AC005622.1-201ENST00000636801 1703 ntBASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 AL596257.1-201ENST00000641463 2694 ntBASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 U82695.1-201ENST00000635752 1889 ntBASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HDGFL3Q9Y3E1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms