Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 HLA-A-202ENST00000376806 1854 ntBASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 AC073347.1-201ENST00000421633 2643 ntBASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 AC132008.2-207ENST00000454517 770 ntBASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 AC093458.2-201ENST00000623150 629 ntBASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 AC013268.4-201ENST00000637413 2228 ntBASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB4Q9UN71 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 NCF1C-201ENST00000438382 1427 ntBASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 AP002414.1-201ENST00000391405 1147 ntBASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms