Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 AL022326.1-202ENST00000641533 845 ntBASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 AC010491.1-201ENST00000563101 2797 ntBASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 AL603832.2-201ENST00000566195 2125 ntBASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 AP005117.1-201ENST00000584346 1413 ntBASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NIPSNAP3AQ9UFN0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 AL356309.3-201ENST00000624132 1934 ntBASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 MIR3180-1-201ENST00000580374 94 ntBASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 MPDU1-223ENST00000582151 728 ntBASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 MIR3180-3-201ENST00000584616 94 ntBASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 AC138894.3-201ENST00000603787 634 ntBASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 AP001269.4-201ENST00000609611 512 ntBASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NIPSNAP3AQ9UFN0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 KRT8P39-201ENST00000396270 1433 ntBASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 PRYP5-201ENST00000451909 266 ntBASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NIPSNAP3AQ9UFN0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms