Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIP2Q9UDT6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 UXT-AS1-201ENST00000590504 1525 ntBASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIP2Q9UDT6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 KRT18P32-201ENST00000424695 1287 ntBASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC025678.2-201ENST00000562061 970 ntBASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC013467.2-201ENST00000605472 835 ntBASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC021097.1-201ENST00000607902 574 ntBASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 AC011270.2-201ENST00000624293 2550 ntBASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 LINC00895-201ENST00000629028 1637 ntBASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP2Q9UDT6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms