Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 AL049597.2-201ENST00000565575 961 ntBASIC16.28■□□□□ 0.2
MKS1Q9NXB0 AC006557.2-201ENST00000592985 1240 ntBASIC16.28■□□□□ 0.2
MKS1Q9NXB0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.28■□□□□ 0.2
MKS1Q9NXB0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MKS1Q9NXB0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 AC006486.2-201ENST00000624246 2199 ntBASIC16.27■□□□□ 0.2
MKS1Q9NXB0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 LAGE3P1-201ENST00000425356 484 ntBASIC16.27■□□□□ 0.2
MKS1Q9NXB0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 AC025062.2-201ENST00000605477 670 ntBASIC16.27■□□□□ 0.2
MKS1Q9NXB0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 AL732292.2-201ENST00000609649 430 ntBASIC16.27■□□□□ 0.2
MKS1Q9NXB0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MKS1Q9NXB0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MKS1Q9NXB0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 KRT18P27-201ENST00000427733 1299 ntBASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 RPS15P9-201ENST00000494093 319 ntBASIC16.26■□□□□ 0.19
MKS1Q9NXB0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 DBET-201ENST00000630918 3363 ntBASIC16.26■□□□□ 0.19
MKS1Q9NXB0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 FAM45BP-202ENST00000592932 1624 ntBASIC16.26■□□□□ 0.19
MKS1Q9NXB0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.26■□□□□ 0.19
MKS1Q9NXB0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.25■□□□□ 0.19
MKS1Q9NXB0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms