Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 SPCS2P4-201ENST00000436160 681 ntBASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 KRT8P23-201ENST00000560090 1207 ntBASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 UXT-AS1-201ENST00000590504 1525 ntBASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP3Q9BWW4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AC009093.7-201ENST00000623853 1223 ntBASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 KRT8P39-201ENST00000396270 1433 ntBASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AL671710.1-201ENST00000610245 2349 ntBASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP3Q9BWW4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
SSBP3Q9BWW4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSBP3Q9BWW4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSBP3Q9BWW4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
SSBP3Q9BWW4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms