Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AC079776.2-201ENST00000641154 1609 ntBASIC9.9□□□□□ -0.82
LIMD2Q9BT23 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 COPE-211ENST00000600932 1144 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AC073592.4-201ENST00000623827 446 ntBASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AL022326.1-202ENST00000641533 845 ntBASIC9.9□□□□□ -0.82
LIMD2Q9BT23 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LIMD2Q9BT23 AC024909.3-201ENST00000611513 2257 ntBASIC9.9□□□□□ -0.83
LIMD2Q9BT23 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 AC097637.2-201ENST00000624096 1997 ntBASIC9.9□□□□□ -0.83
LIMD2Q9BT23 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC9.9□□□□□ -0.83
LIMD2Q9BT23 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms