Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AP003680.1-201ENST00000598970 3660 ntBASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HDHD3Q9BSH5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 FGFR3P6-201ENST00000457012 610 ntBASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 AC107918.2-201ENST00000530817 355 ntBASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HDHD3Q9BSH5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.96□□□□□ -0.18
HDHD3Q9BSH5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms