Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 KRT18P21-201ENST00000515767 1272 ntBASIC14.21□□□□□ -0.13
NICN1Q9BSH3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 AL591684.3-201ENST00000605187 298 ntBASIC14.21□□□□□ -0.13
NICN1Q9BSH3 AL590326.2-201ENST00000625139 305 ntBASIC14.21□□□□□ -0.13
NICN1Q9BSH3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.21□□□□□ -0.13
NICN1Q9BSH3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NICN1Q9BSH3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 PRYP5-201ENST00000451909 266 ntBASIC14.2□□□□□ -0.14
NICN1Q9BSH3 MIR4492-201ENST00000581627 80 ntBASIC14.2□□□□□ -0.14
NICN1Q9BSH3 MPDU1-223ENST00000582151 728 ntBASIC14.2□□□□□ -0.14
NICN1Q9BSH3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 KRT8P39-201ENST00000396270 1433 ntBASIC14.2□□□□□ -0.14
NICN1Q9BSH3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.2□□□□□ -0.14
NICN1Q9BSH3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 AC002310.6-201ENST00000624451 1377 ntBASIC14.2□□□□□ -0.14
NICN1Q9BSH3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NICN1Q9BSH3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PAWRP1-201ENST00000451083 565 ntBASIC14.19□□□□□ -0.14
NICN1Q9BSH3 AC132008.2-207ENST00000454517 770 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms