Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 HCG4-201ENST00000418983 998 ntBASIC19.15■□□□□ 0.66
PGBD1Q96JS3 RPS8P6-201ENST00000426177 609 ntBASIC19.15■□□□□ 0.66
PGBD1Q96JS3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 AC140658.5-201ENST00000438532 169 ntBASIC19.15■□□□□ 0.66
PGBD1Q96JS3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 AC005829.1-201ENST00000570002 483 ntBASIC19.15■□□□□ 0.66
PGBD1Q96JS3 AC099522.2-201ENST00000607001 744 ntBASIC19.15■□□□□ 0.66
PGBD1Q96JS3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.14■□□□□ 0.66
PGBD1Q96JS3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.14■□□□□ 0.66
PGBD1Q96JS3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PGBD1Q96JS3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PGBD1Q96JS3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 RNU1-129P-201ENST00000384064 167 ntBASIC19.14■□□□□ 0.65
PGBD1Q96JS3 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.14■□□□□ 0.65
PGBD1Q96JS3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 U1.21-201ENST00000580816 167 ntBASIC19.14■□□□□ 0.65
PGBD1Q96JS3 LINC00554-201ENST00000564841 3011 ntBASIC19.14■□□□□ 0.65
PGBD1Q96JS3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD1Q96JS3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 CEND1P1-201ENST00000451006 455 ntBASIC19.13■□□□□ 0.65
PGBD1Q96JS3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 AL031055.1-201ENST00000606362 631 ntBASIC19.13■□□□□ 0.65
PGBD1Q96JS3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 AL691403.2-201ENST00000618460 490 ntBASIC19.13■□□□□ 0.65
PGBD1Q96JS3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 AC134684.3-201ENST00000641758 218 ntBASIC19.13■□□□□ 0.65
PGBD1Q96JS3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PGBD1Q96JS3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms