Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AL353593.2-201ENST00000602529 1483 ntBASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AL671710.1-201ENST00000610245 2349 ntBASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AL671277.2-201ENST00000458060 996 ntBASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 DUX4L26-201ENST00000489078 1255 ntBASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AC063952.2-201ENST00000498792 1227 ntBASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 AC069224.1-201ENST00000566372 1715 ntBASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CHMP6Q96FZ7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 AC023908.3-201ENST00000564211 3047 ntBASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 AC005332.3-201ENST00000589904 676 ntBASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 AC136621.1-201ENST00000624017 2304 ntBASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 TCAF2P1-201ENST00000291129 2421 ntBASIC16.66■□□□□ 0.26
CHMP6Q96FZ7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 KRT8P49-201ENST00000604166 1432 ntBASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 MIR662-201ENST00000384847 95 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms