Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GRAMD1AQ96CP6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AP006288.1-201ENST00000446065 395 ntBASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AC134684.3-201ENST00000641758 218 ntBASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GRAMD1AQ96CP6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 MCCD1P2-201ENST00000423228 335 ntBASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 AL355385.1-201ENST00000606123 409 ntBASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GRAMD1AQ96CP6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GRAMD1AQ96CP6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms