Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC3Q92529 AC023274.1-201ENST00000418278 595 ntBASIC17.55■□□□□ 0.4
SHC3Q92529 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.55■□□□□ 0.4
SHC3Q92529 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.55■□□□□ 0.4
SHC3Q92529 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SHC3Q92529 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHC3Q92529 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
SHC3Q92529 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.54■□□□□ 0.4
SHC3Q92529 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.54■□□□□ 0.4
SHC3Q92529 KRT18P58-201ENST00000527480 1120 ntBASIC17.54■□□□□ 0.4
SHC3Q92529 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.54■□□□□ 0.4
SHC3Q92529 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.54■□□□□ 0.4
SHC3Q92529 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.54■□□□□ 0.4
SHC3Q92529 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.54■□□□□ 0.4
SHC3Q92529 AC091812.2-201ENST00000619081 385 ntBASIC17.54■□□□□ 0.4
SHC3Q92529 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.54■□□□□ 0.4
SHC3Q92529 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SHC3Q92529 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHC3Q92529 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SHC3Q92529 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHC3Q92529 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC3Q92529 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SHC3Q92529 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.53■□□□□ 0.4
SHC3Q92529 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.53■□□□□ 0.4
SHC3Q92529 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SHC3Q92529 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 MIR648-201ENST00000385046 94 ntBASIC17.53■□□□□ 0.4
SHC3Q92529 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.53■□□□□ 0.4
SHC3Q92529 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.53■□□□□ 0.4
SHC3Q92529 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.53■□□□□ 0.4
SHC3Q92529 AC040169.1-201ENST00000565382 521 ntBASIC17.53■□□□□ 0.4
SHC3Q92529 RARRES2P8-201ENST00000566335 367 ntBASIC17.53■□□□□ 0.4
SHC3Q92529 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.53■□□□□ 0.4
SHC3Q92529 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.53■□□□□ 0.4
SHC3Q92529 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 AL671883.3-201ENST00000603274 991 ntBASIC17.53■□□□□ 0.4
SHC3Q92529 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.53■□□□□ 0.4
SHC3Q92529 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 AC007950.2-201ENST00000615045 2347 ntBASIC17.53■□□□□ 0.4
SHC3Q92529 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
SHC3Q92529 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHC3Q92529 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SHC3Q92529 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms