Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC44A1Q8WWI5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC006557.2-201ENST00000592985 1240 ntBASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 AC005622.1-201ENST00000636801 1703 ntBASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 PRAL-201ENST00000624952 3286 ntBASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC44A1Q8WWI5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 AC013268.4-201ENST00000637413 2228 ntBASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 LAGE3P1-201ENST00000425356 484 ntBASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 RPS15P9-201ENST00000494093 319 ntBASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 GGTLC5P-201ENST00000617623 998 ntBASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 AL513477.1-201ENST00000602865 2407 ntBASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 DBET-201ENST00000630918 3363 ntBASIC16.54■□□□□ 0.24
SLC44A1Q8WWI5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 SCARNA2-201ENST00000458748 420 ntBASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 KRT18P31-201ENST00000506277 1292 ntBASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SLC44A1Q8WWI5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC44A1Q8WWI5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms