Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 PRAL-201ENST00000624952 3286 ntBASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
C1orf54Q8WWF1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 AC073621.1-201ENST00000392730 636 ntBASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 KRT18P27-201ENST00000427733 1299 ntBASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 AC012313.10-201ENST00000623509 926 ntBASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 AP001350.2-201ENST00000625104 1094 ntBASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C1orf54Q8WWF1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 AC005412.3-201ENST00000580309 715 ntBASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C1orf54Q8WWF1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.15■□□□□ 0.34
C1orf54Q8WWF1 OR7E14P-202ENST00000530490 1290 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms