Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 AL691403.2-201ENST00000618460 490 ntBASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH19Q8TAB3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AC016027.1-202ENST00000607927 1699 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 RPSAP43-201ENST00000402237 625 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AC004832.2-201ENST00000426397 482 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AP002472.1-201ENST00000577490 586 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AC055717.3-201ENST00000622967 595 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
PCDH19Q8TAB3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 MIR3687-2-201ENST00000577708 61 ntBASIC17■□□□□ 0.31
PCDH19Q8TAB3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AC068137.2-201ENST00000605408 478 ntBASIC17■□□□□ 0.31
PCDH19Q8TAB3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AL078644.1-201ENST00000609881 752 ntBASIC17■□□□□ 0.31
PCDH19Q8TAB3 MIR3687-1-201ENST00000614492 61 ntBASIC17■□□□□ 0.31
PCDH19Q8TAB3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms