Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 RPS2P28-201ENST00000314255 741 ntBASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AL031284.1-201ENST00000419297 478 ntBASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AC079776.4-201ENST00000511039 504 ntBASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AC006557.2-201ENST00000592985 1240 ntBASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AC004706.3-202ENST00000621574 984 ntBASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 GPR89P-201ENST00000407924 1495 ntBASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP61Q8NHU2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 AC006058.4-201ENST00000624016 1670 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 AL590787.1-201ENST00000568856 1315 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ELK2BP-201ENST00000415014 1224 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 AC012640.2-201ENST00000561606 901 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 AL049840.3-201ENST00000602669 611 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 FAM215A-202ENST00000632077 792 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 MTHFR-217ENST00000641820 1569 ntBASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP61Q8NHU2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 AC105339.3-201ENST00000560043 636 ntBASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 AC008735.5-201ENST00000623544 497 ntBASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 AP002414.3-201ENST00000589352 1468 ntBASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 AL365209.1-201ENST00000624418 6473 ntBASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP61Q8NHU2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms