Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 PCGF3-213ENST00000620529 1899 ntBASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 EMBP1-201ENST00000458200 901 ntBASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 AP002414.3-201ENST00000589352 1468 ntBASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 AC068418.2-201ENST00000577309 3703 ntBASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CLHC1Q8NHS4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AC006449.6-201ENST00000612330 2296 ntBASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 HNRNPDP1-201ENST00000439535 754 ntBASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AC087641.1-201ENST00000557561 1021 ntBASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AC012640.2-201ENST00000561606 901 ntBASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 LINC00554-201ENST00000564841 3011 ntBASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLHC1Q8NHS4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLHC1Q8NHS4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms