Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.93□□□□□ -0.02
RP1L1Q8IWN7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 HLA-H-201ENST00000383620 1096 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 AC142381.1-201ENST00000426099 345 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 AC119751.2-201ENST00000504529 210 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RP1L1Q8IWN7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 KRT18P34-201ENST00000488218 1270 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 ZNF890P-202ENST00000530367 1156 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 AP005482.1-201ENST00000563722 1273 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 AC073389.1-201ENST00000595595 795 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 SPDYE12P-201ENST00000618416 771 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 COX11-210ENST00000639671 696 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 AL021920.2-201ENST00000624828 1351 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms