Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 SLC25A6P4-201ENST00000586535 553 ntBASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDKL3Q8IVW4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 HCG4B-203ENST00000450128 991 ntBASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 IGHV3-22-201ENST00000520721 359 ntBASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 AC010507.1-201ENST00000633895 436 ntBASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.96■□□□□ 0.31
CDKL3Q8IVW4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CDKL3Q8IVW4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 TPM4P1-201ENST00000436100 807 ntBASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 AC096734.2-201ENST00000562054 433 ntBASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDKL3Q8IVW4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 AL365203.3-201ENST00000609742 2057 ntBASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 Z83851.2-201ENST00000609564 659 ntBASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL3Q8IVW4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms