Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AL596087.1-201ENST00000400979 1969 ntBASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AC046158.3-201ENST00000624947 2558 ntBASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AC098831.1-202ENST00000438821 336 ntBASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AC108751.1-201ENST00000490852 363 ntBASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AC012569.1-201ENST00000591191 1524 ntBASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00346Q8IVM7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 MRPL3P1-201ENST00000400109 1033 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 FAAHP1-202ENST00000446499 1238 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 AC104692.2-201ENST00000603054 253 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ACTL9-202ENST00000612068 1252 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 AC010654.1-201ENST00000615722 808 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 REXO1L8P-201ENST00000604378 1897 ntBASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
LINC00346Q8IVM7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00346Q8IVM7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms