Protein–RNA interactions for Protein: Q86UP8

GTF2IRD2, General transcription factor II-I repeat domain-containing protein 2A, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2Q86UP8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 HLA-A-201ENST00000376802 1334 ntBASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 RPS2P1-201ENST00000434010 821 ntBASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 MIR1199-201ENST00000621445 119 ntBASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 AC013268.4-201ENST00000637413 2228 ntBASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GTF2IRD2Q86UP8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 AC073347.1-201ENST00000421633 2643 ntBASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GTF2IRD2Q86UP8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GTF2IRD2Q86UP8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GTF2IRD2Q86UP8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms