Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 AC002310.6-201ENST00000624451 1377 ntBASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP1BQ7LBR1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 MIR1233-2-201ENST00000408138 82 ntBASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 MIR1233-1-201ENST00000408722 82 ntBASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 CXCL1P1-201ENST00000502804 216 ntBASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 AC096734.2-201ENST00000562054 433 ntBASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 MTDHP5-201ENST00000598980 586 ntBASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 AC105020.1-201ENST00000435356 2205 ntBASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP1BQ7LBR1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 EGFEM1P-202ENST00000431685 1563 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms