Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AC024267.1-201ENST00000582320 895 ntBASIC17.4■□□□□ 0.38
VARS2Q5ST30 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AL359881.2-201ENST00000602973 570 ntBASIC17.4■□□□□ 0.38
VARS2Q5ST30 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
VARS2Q5ST30 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
VARS2Q5ST30 PCGF3-213ENST00000620529 1899 ntBASIC17.39■□□□□ 0.38
VARS2Q5ST30 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VARS2Q5ST30 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
VARS2Q5ST30 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
VARS2Q5ST30 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 SERBP1P5-201ENST00000510079 1181 ntBASIC17.39■□□□□ 0.37
VARS2Q5ST30 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AC061975.2-201ENST00000581722 295 ntBASIC17.39■□□□□ 0.37
VARS2Q5ST30 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.39■□□□□ 0.37
VARS2Q5ST30 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VARS2Q5ST30 AC078925.2-201ENST00000624013 1973 ntBASIC17.39■□□□□ 0.37
VARS2Q5ST30 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 OR8S1-201ENST00000310194 1080 ntBASIC17.38■□□□□ 0.37
VARS2Q5ST30 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 AL079307.3-201ENST00000556114 283 ntBASIC17.38■□□□□ 0.37
VARS2Q5ST30 AL391001.1-201ENST00000602747 715 ntBASIC17.38■□□□□ 0.37
VARS2Q5ST30 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VARS2Q5ST30 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VARS2Q5ST30 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VARS2Q5ST30 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms