Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
CDR2Q01850 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDR2Q01850 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CDR2Q01850 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDR2Q01850 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.6■□□□□ 0.41
CDR2Q01850 FDX1P1-201ENST00000449115 551 ntBASIC17.6■□□□□ 0.41
CDR2Q01850 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.6■□□□□ 0.41
CDR2Q01850 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.6■□□□□ 0.41
CDR2Q01850 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
CDR2Q01850 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.6■□□□□ 0.41
CDR2Q01850 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.6■□□□□ 0.41
CDR2Q01850 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.6■□□□□ 0.41
CDR2Q01850 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.6■□□□□ 0.41
CDR2Q01850 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.6■□□□□ 0.41
CDR2Q01850 AC007064.4-201ENST00000637740 555 ntBASIC17.6■□□□□ 0.41
CDR2Q01850 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.6■□□□□ 0.41
CDR2Q01850 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.6■□□□□ 0.41
CDR2Q01850 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.6■□□□□ 0.41
CDR2Q01850 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDR2Q01850 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDR2Q01850 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 IL9RP2-201ENST00000423948 1312 ntBASIC17.59■□□□□ 0.41
CDR2Q01850 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.59■□□□□ 0.41
CDR2Q01850 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.59■□□□□ 0.41
CDR2Q01850 RPL13AP23-201ENST00000480739 586 ntBASIC17.59■□□□□ 0.41
CDR2Q01850 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 AC109635.5-201ENST00000533593 962 ntBASIC17.59■□□□□ 0.41
CDR2Q01850 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.59■□□□□ 0.41
CDR2Q01850 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
CDR2Q01850 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDR2Q01850 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.59■□□□□ 0.41
CDR2Q01850 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDR2Q01850 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.59■□□□□ 0.41
CDR2Q01850 AC064836.3-201ENST00000607928 673 ntBASIC17.59■□□□□ 0.41
CDR2Q01850 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDR2Q01850 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.59■□□□□ 0.41
CDR2Q01850 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDR2Q01850 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CDR2Q01850 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.58■□□□□ 0.41
CDR2Q01850 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.58■□□□□ 0.41
CDR2Q01850 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.58■□□□□ 0.41
CDR2Q01850 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CDR2Q01850 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDR2Q01850 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.58■□□□□ 0.41
CDR2Q01850 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.58■□□□□ 0.41
CDR2Q01850 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDR2Q01850 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.58■□□□□ 0.4
CDR2Q01850 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.58■□□□□ 0.4
CDR2Q01850 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDR2Q01850 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.58■□□□□ 0.4
CDR2Q01850 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.58■□□□□ 0.4
CDR2Q01850 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.58■□□□□ 0.4
CDR2Q01850 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.58■□□□□ 0.4
CDR2Q01850 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.58■□□□□ 0.4
CDR2Q01850 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.58■□□□□ 0.4
CDR2Q01850 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.58■□□□□ 0.4
CDR2Q01850 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms