Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDC42P60953 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.15■□□□□ 0.02
CDC42P60953 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.15■□□□□ 0.02
CDC42P60953 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.15■□□□□ 0.02
CDC42P60953 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
CDC42P60953 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDC42P60953 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.15■□□□□ 0.02
CDC42P60953 AC006058.4-201ENST00000624016 1670 ntBASIC15.15■□□□□ 0.02
CDC42P60953 INTS4P1-201ENST00000438455 1935 ntBASIC15.15■□□□□ 0.02
CDC42P60953 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.15■□□□□ 0.02
CDC42P60953 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC42P60953 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC42P60953 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDC42P60953 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDC42P60953 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC42P60953 OR2I1P-209ENST00000641730 5365 ntBASIC15.14■□□□□ 0.01
CDC42P60953 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDC42P60953 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDC42P60953 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.14■□□□□ 0.01
CDC42P60953 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 SIGLEC16-201ENST00000599858 1437 ntBASIC15.14■□□□□ 0.01
CDC42P60953 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC42P60953 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDC42P60953 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC42P60953 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 AC112504.1-201ENST00000623415 1841 ntBASIC15.13■□□□□ 0.01
CDC42P60953 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.13■□□□□ 0.01
CDC42P60953 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 AL671277.2-201ENST00000458060 996 ntBASIC15.13■□□□□ 0.01
CDC42P60953 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 AC091607.1-201ENST00000490318 1060 ntBASIC15.13■□□□□ 0.01
CDC42P60953 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.13■□□□□ 0.01
CDC42P60953 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.13■□□□□ 0.01
CDC42P60953 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC42P60953 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC42P60953 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC42P60953 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC42P60953 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC42P60953 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms